Antigen

Antigen Class

TFs and others

Antigen

ZNF425

Cell type

Cell type Class

Pluripotent stem cell

Cell type

iPS cells

NA

NA

Sample

age

30 year

sample type

cell line

cell line

WTC11

sex

male

dev stage

adult

donor ID

ENCDO882UJI

lab

Michael Snyder, Stanford

source

Richard Myers

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

general protocol: https://www.encodeproject.org/documents/716003cd-3ce7-41ce-b1e3-6f203b6632a0/@@download/attachment/ENCODE4%20_Snyder_ChIP-seq_BiorupterTruSeqProtocol_v1.pdf

Sequencing Platform

instrument_model

Illumina NovaSeq 6000

hg38

Number of total reads

43618315

Reads aligned (%)

97.5

Duplicates removed (%)

11.1

Number of peaks

1382 (qval < 1E-05)

hg19

Number of total reads

43618315

Reads aligned (%)

97.0

Duplicates removed (%)

11.3

Number of peaks

733 (qval < 1E-05)